BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025A07LP1|AL428313
(856 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig878 1674 0.0
>3x_Contig878
Length = 4897
Score = 1674 bits (842), Expect = 0.0
Identities = 848/853 (99%)
Strand = Plus / Plus
Query: 4 gaacatatttttgatgctttttgatatgtgttgtaatttgattttatcagaatacaacta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3164 gaacatatttttgatgctttttgatatgtgttgtaatttgattttatcagaatacaacta 3223
Query: 64 taacatccgtaaattctgaacaaactacaaccaatcagtcatggctgctaacaaggtttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3224 taacatccgtaaattctgaacaaactacaaccaatcagtcatggctgctaacaaggtttt 3283
Query: 124 caacgttgctgtgttcttcgttgtgttcagagaatgtttagaagcagcggtgattgtttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3284 caacgttgctgtgttcttcgttgtgttcagagaatgtttagaagcagcggtgattgtttc 3343
Query: 184 cgtgttgctttctttcttgaaacaatccatcggttctaatgatatggccacttataaaag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3344 cgtgttgctttctttcttgaaacaatccatcggttctaatgatatggccacttataaaag 3403
Query: 244 gttgagaatgcatgtctggatcggtgttgttgctggtttcatcatttgtatggccattgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3404 gttgagaatgcatgtctggatcggtgttgttgctggtttcatcatttgtatggccattgg 3463
Query: 304 tggtggtttcattggtgcttactaccgttacgaaaatgatattttcggttctgctgaaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3464 tggtggtttcattggtgcttactaccgttacgaaaatgatattttcggttctgctgaaga 3523
Query: 364 tttatgggaaggtgtcttctgtatcatcgctaccttaatgatttcygtcatgggtattgc 423
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3524 tttatgggaaggtgtcttctgtatcatcgctaccttaatgatttctgtcatgggtattgc 3583
Query: 424 yatgtyaagagtcaacaagatgcaagccaaatggagagttaagattgccaaggccatgct 483
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3584 tatgttaagagtcaacaagatgcaagccaaatggagagttaagattgccaaggccatgct 3643
Query: 484 tgaagttccaaaggacagacgtaagamatggagtcttaaatactgggctaccagatattc 543
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3644 tgaagttccaaaggacagacgtaagaaatggagtcttaaatactgggctaccagatattc 3703
Query: 544 tatgtttttgttgccanttatcactgttttgagagaaggtttggaagccgtcgtgttcgt 603
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3704 tatgtttttgttgccatttatcactgttttgagagaaggtttggaagccgtcgtgttcgt 3763
Query: 604 tgctggtgccggtattaccaccaaggattccaaggccactgcgtacccattgcctgtcgt 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3764 tgctggtgccggtattaccaccaaggattccaaggccactgcgtacccattgcctgtcgt 3823
Query: 664 cattgggttaattgctggtatcatcgtaggtactttgttgtactacggtacttctaagtc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3824 cattgggttaattgctggtatcatcgtaggtactttgttgtactacggtacttctaagtc 3883
Query: 724 atctctacaaatcttcttggtcatttctacttgtgttctttacttgattgcttccgggtt 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3884 atctctacaaatcttcttggtcatttctacttgtgttctttacttgattgcttccgggtt 3943
Query: 784 gttctccagaggtgtgtggtacttcgataactattacttcaacaagaagaccggtggtga 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3944 gttctccagaggtgtgtggtacttcgataactattacttcaacaagaagaccggtggtga 4003
Query: 844 cgcatccgaatcc 856
|||||||||||||
Sbjct: 4004 cgcatccgaatcc 4016
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6492
Number of Sequences: 1807
Number of extensions: 6492
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 856
length of database: 10,358,551
effective HSP length: 16
effective length of query: 840
effective length of database: 10,329,639
effective search space: 8676896760
effective search space used: 8676896760
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)